category
bioRxiv
date
Mar 20, 2026
slug
status
Published
summary
通过计算蛋白质设计策略改造GH1家族酶的第二壳残基,使其在不改变催化残基的情况下获得双功能(α/β-糖苷键水解能力),并揭示保留型GH的立体化学约束具有可塑性。
tags
合成生物学
蛋白质进化
type
Post
📄 原文题目
Engineering a bifunctional alfa and beta hydrolase from a GH1 beta-glycosidase
🔗 原文链接
💡 AI 核心解读
通过计算蛋白质设计策略改造GH1家族酶的第二壳残基,使其在不改变催化残基的情况下获得双功能(α/β-糖苷键水解能力),并揭示保留型GH的立体化学约束具有可塑性。
📝 英文原版摘要
Glycoside hydrolases (GHs) play central roles in carbohydrate metabolism and are widely exploited for industrial and biomedical applications. However, they are often not optimal for applications due to their constrained function and strict stereochemical specificity, necessitating the discovery and optimization of distinct enzymes for each glycosidic configuration. Members of glycoside hydrolase family 1 (GH1) are archetypal retaining {beta}-glycosidases, while -specific activity is rare within this family. Here, I demonstrate that a retaining GH1 enzyme can be engineered to hydrolyze both {beta}- and -configured substrates without altering its canonical catalytic residues. Using a well-characterized {beta}-glycosidase and computational protein design strategies targeting second-shell residues surrounding the active site, a bifunctional {beta}-/-glycosidase containing 45 mutations was generated. The engineered variant acquired the ability to hydrolyze the -configured substrate 4-nitrophenyl--D-glucopyranoside while retaining activity toward the originals {beta}-substrates, with reduced catalytic efficiency and thermostability. Structural modeling and docking analyses reveal that the engineered enzyme preserves the original fold and accommodates substrates within the catalytic pocket in a similar manner to the wild type. These findings provide direct evidence that stereochemical constraint in retaining GH is more flexible than previously appreciated and can be modulated through targeted engineering.
- 作者:NotionNext
- 链接:https://tangly1024.com/article/32a48bd6-1f96-8135-86f9-eeea89ee0463
- 声明:本文采用 CC BY-NC-SA 4.0 许可协议,转载请注明出处。
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