category
bioRxiv
date
Feb 18, 2026
slug
status
Published
summary
创新性提出'扫描与捕获'模型,揭示Cohesin介导的环状挤出与锚定元件协同促进增强子-启动子互作的分子机制;通过单细胞成像与聚合物模拟结合,发现WAPL调控Cohesin稳定性可补偿锚定缺失,为发育调控提供新理论框架。
tags
基因编辑
单细胞测序
type
Post
📄 原文题目
Loop Extrusion Accelerates Long-Range Enhancer-Promoter Searches in Living Embryos
🔗 原文链接
💡 AI 核心解读
创新性提出'扫描与捕获'模型,揭示Cohesin介导的环状挤出与锚定元件协同促进增强子-启动子互作的分子机制;通过单细胞成像与聚合物模拟结合,发现WAPL调控Cohesin稳定性可补偿锚定缺失,为发育调控提供新理论框架。
📝 英文原版摘要
Long-range gene regulation underlies a variety of human developmental disorders including Cornelia de Lange syndrome and polydactyly. Cohesin-mediated loop extrusion and tether-like elements are two major mechanisms implicated in fostering long-range enhancer-promoter (E-P) contacts. However, our understanding of the contributions of these mechanisms to the kinetics of E-P interactions is limited. Here we employ a combination of quantitative single-cell imaging, genetic manipulations and polymer simulations to examine the interplay of cohesin-mediated loop extrusion and tethering elements in the timely activation of gene expression in living Drosophila embryos. Depletion of NIPBL or deletion of an enhancer-proximal CTCF anchor element reduced expression without changing the duration of individual transcriptional bursts. Genetic epistasis experiments recapitulated polymer simulations predicting complementation of tether deletions by augmenting the stability of cohesin via reduced levels of WAPL. We propose a ''scan and snag'' model whereby directional cohesin-driven enhancer scanning promotes diffusion-mediated tethering interactions to produce successful E-P contacts and transcriptional activation. We discuss how modulating cohesin stability and the ''stickiness'' of looping factors can fine-tune the levels and timing of gene expression in mammalian developmental and disease processes.
- 作者:NotionNext
- 链接:https://tangly1024.com/article/30b48bd6-1f96-813f-b6db-fabdd5007569
- 声明:本文采用 CC BY-NC-SA 4.0 许可协议,转载请注明出处。
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