category
bioRxiv
date
Feb 24, 2026
slug
status
Published
summary
首次实现该物种染色体水平基因组组装,采用纳米孔长读长测序结合Hi-C技术,获得2.4Gb高质量基因组,为研究其药用特性及演化关系提供基础资源。
tags
测序技术
type
Post

📄 原文题目

Chromosome-level genome assembly of Helichrysum odoratissimum, a medicinal plant from Southern Africa

🔗 原文链接

💡 AI 核心解读

首次实现该物种染色体水平基因组组装,采用纳米孔长读长测序结合Hi-C技术,获得2.4Gb高质量基因组,为研究其药用特性及演化关系提供基础资源。

📝 英文原版摘要

Helichrysum odoratissimum, a plant species native to Southern Africa, holds deep cultural significance and is widely used in traditional medicine. It is valued for its antimicrobial and anti-inflammatory properties and is cultivated and traded in South Africa due to its growing commercial relevance to the pharmaceutical and cosmetic industries. Despite its ecological and economic importance, genomic resources for this species remain limited. Here, we report a high-quality chromosome-level genome assembly for H. odoratissimum to facilitate investigations into its genetic basis of bioactivity, environmental adaptation, and taxonomic relationships. High-molecular-weight DNA extracted from leaf tissue was sequenced using Oxford Nanopore Technologies (ONT) long-read sequencing, and Hi-C proximity ligation data were generated to enable chromosome-scale scaffolding. The final assembly spans 2.4 Gb, with a scaffold N50 of 354 Mb, and was anchored and oriented into seven chromosomes, with 2,935 smaller scaffolds remaining unplaced. Assembly quality and completeness were evaluated using QUAST and BUSCO, and chromosomal structure was validated using Hi-C contact maps. This genome provides a foundational resource for functional genomics, conservation planning, molecular breeding, and the discovery of bioactive compounds underpinning the medicinal and commercial value of H. odoratissimum.
靶向敲除CYP79A1降低谷粒高粱的氰苷生成潜力p70核糖体蛋白S6激酶(p70S6K)作为16p11.2缺失和重复综合征精神症状的潜在外周生物标志物
Loading...