category
bioRxiv
date
Feb 27, 2026
slug
status
Published
summary
创新性地整合mRNA和tRNA测序数据,量化分析密码子使用与tRNA丰度的关系,发现低供应密码子在翻译起始位点的耗竭现象,并揭示密码子偏好与翻译起始位点距离的非随机关联,为蛋白质丰度调控提供了新视角。
tags
测序技术
蛋白质组学
type
Post
📄 原文题目
Variation of Human Transfer RNA Demand and Supply
🔗 原文链接
💡 AI 核心解读
创新性地整合mRNA和tRNA测序数据,量化分析密码子使用与tRNA丰度的关系,发现低供应密码子在翻译起始位点的耗竭现象,并揭示密码子偏好与翻译起始位点距离的非随机关联,为蛋白质丰度调控提供了新视角。
📝 英文原版摘要
Codons function as translation units in open-reading-frames (ORF) of genes to encode for proteins. Transfer RNAs (tRNAs) mediate the connection of every codon to its cognate amino acid. Despite the cooperation between messenger and transfer RNA during translation, approaches to integrate codon usage and tRNA quantities remain to be established. Using matched mRNA- and tRNA-sequencing of peripheral blood cells, we apply a precision-biology approach quantitatively integrating transcriptomic codon- and corresponding tRNA-abundance. Thereby, we classify codons as highly or lowly supplied and compare optimality of synonymous codons. Additionally, we describe substantial differences regarding the conservation of a codon's tRNA-supply among healthy donors. A meta-ORF-analysis demonstrates depletion of lowly supplied codons at translation start sites. Discrepancy between codon- and tRNA-abundance, and codon-preference depending on the distance to the translation start site, seem to be non-random and could affect translational speed and thus provide a novel level of regulation of protein abundance.
- 作者:NotionNext
- 链接:https://tangly1024.com/article/31548bd6-1f96-8152-a06b-dec8821fad77
- 声明:本文采用 CC BY-NC-SA 4.0 许可协议,转载请注明出处。
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